Anahita Khammari

PHD Candidate of Biophysics.  2014 – Present

Department of Biophysic, Tarbiat Modarres University, Tehran, Iran

Thesis title:

The effect of intermediate conformations on the protein folding simulation “

Master of Science in Biophysics. 2011 – 2014

Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran.

Thesis title:

Insights into the molecular interaction between two polyoxygenated cinnamoylcoumarin derivatives and human serum albumin

Bachelor of Science in Chemistry. 2005 – 2009

Department of Chemistry, University of Sistan and Baluchestan, Zahedan, Iran.


  • Research Interest
  • Protein-Ligand interaction
  • Protein-Protein interaction
  • Free energy calculations
  • Enhanced sampling methods


Computational methods and softwares

Molecular dynamic simulations (NAMD, Gromacs)

Protein docking methods (Autodock4.2, Autodock Vina, ICM)

Programming languages (TCL, Linux)


Laboratory skills

Isothermal Titration Calorimetry (ITC)

Fluorescence spectroscopy

UV-visible spectroscopy (UV)

Circular Dichroism (CD)

Infrared (IR) and Fourier Transform Infrared (FTIR) spectroscopy


email: [email protected]

[email protected]

Researchgate link:

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